OCTOPUS Publications
08 Mar 2010
Yes
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Publications from the OCTOPUS facility

Yes

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2024

J Phys Chem B. 2024 Aug 15;128(32):7803-7812. doi: 10.1021/acs.jpcb.4c04129. Epub 2024 Aug 6.

M. LledosD. G. CalatayudF. Cortezon-TamaritH. GeC. PourzandS. W. BotchwayM. SodupeA. LledósI. M. EgglestonS. I. Pascu.
Chem. Eur. J. 202430, e202400858. https://doi.org/10.1002/chem.202400858

I Sparkes, RR White, B Bateman, S Botchway, A Ward
The Plant Endoplasmic Reticulum: Methods and Protocols, 179-190

Laura C. Zanetti-Domingues, Michael Hirsch, Lin Wang, Tara A. Eastwood, Karen Baker, Daniel P. Mulvihill, Sheena Radford, Jim Horne, Paul White, Benji Bateman.
​Methods in Cell Biology, Volume 187, 2024, Pages 249-292. DOI: https://doi.org/10.1016/bs.mcb.2024.02.028

Pain C, Tynan C, Botchway SW, Kriechbaumer V.  
Methods Mol Biol. 2024;2772:273-283. doi: 10.1007/978-1-0716-3710-4_20. PMID: 38411821.

Kriechbaumer V, Botchway SW.  
Methods Mol Biol. 2024;2772:169-177. doi: 10.1007/978-1-0716-3710-4_12. PMID: 38411813.

Connor R. Barker, Martin D. King, and Andrew D. Ward
Opt. Express 32, 21042-21060 (2024), https://doi.org/10.1364/OE.520251​

Kalampouka I, Mould RR, Botchway SW, Mackenzie AM, Nunn AV, Thomas EL, Bell JD. 
J Biophotonics. 2024 Aug;17(8):e202400046. doi: 10.1002/jbio.202400046. Epub 2024 Jun 21. PMID: 39155124.

Victoria J. Lloyd, Stephanie L. Burg, Jana Harizanova, Esther Garcia, Olivia Hill, Juan Enciso-Romero, Rory L. Cooper, Silja Flenner, Elena Longo, Imke Greving, Nicola J. Nadeau & Andrew J. Parnell
Nat. Commun. 15, 4073 (2024). https://doi.org/10.1038/s41467-024-48060-3

Yanru Li, Lixin Liu, Selene K. Roberts, and Lin Wang

Opt. Lett. 49, 2621-2624 (2024), https://doi.org/10.1364/OL.514964

Drug-resistant EGFR mutations promote lung cancer by stabilizing interfaces in ligand-free kinase-active EGFR oligomers​

R. Sumanth Iyer, Sarah R. Needham, Ioannis Galdadas, Benjamin M. Davis, Selene K. Roberts, Rico C. H. Man, Laura C. Zanetti-Domingues, David T. Clarke, Gilbert O. Fruhwirth, Peter J. Parker, Daniel J. Rolfe, Francesco L. Gervasio & Marisa L. Martin-Fernandez
Nat. Commun. 15, 2130 (2024). https://doi.org/10.1038/s41467-024-46284-x

Holly. E. Smith, Alasdair M. Mackenzie, Chloe Seddon, Rhys Mould, If Kalampouka, Partha Malakar, Sarah R. Needham, Konstantinos Beis, Jimmy D. Bell, Alistair Nunn & Stanley W. Botchway
Sci. Rep. 14, 5980 (2024). https://doi.org/10.1038/s41598-024-55780-5

Mould RR, Mackenzie AM, Kalampouka I, Nunn AVW, Thomas EL, Bell JD and Botchway SW (2024)
Front. Physiol. 15:1348915. doi: 10.3389/fphys.2024.1348915

Alasdair M. Mackenzie, Holly E. Smith, Rhys R. Mould, Jimmy D. Bell, Alistair V.W. Nunn, Stanley W. Botchway
Journal of Photochemistry and Photobiology, Volume 19, 2024, 100224, ISSN 2666-4690, https://doi.org/10.1016/j.jpap.2023.100224​.

2023

dos Santos, Á., Rollins, D.E., Hari-Gupta, Y. et al.  
Nat. Commun., 14, 2855 (2023). https://doi.org/10.1038/s41467-023-38572-9

​Jones, D. & Andrews, M. & Botchway, S. & Ward, A. & Lloyd, Jon & Natrajan, Louise. 
Royal Society of Chemistry Radio Chemical Analysis VII, (2023) DOI: https://doi.org/10.1039/9781837670758​ 

James M. Rowland; Thijs L. van der Plas; Matthias Loidolt; Robert M. Lees; Joshua Keeling; Jonas Dehning; Thomas Akam; Viola Priesemann; Adam M. Packer
Nature Neuroscience, DOI: 10.1038/s41593-023-01413-5

Clancy E; Ramadurai S; Needham SR; Baker K; Eastwood TA; Weinstein JA; Mulvihill DP; Botchway SW
Scientific reports, DOI: 10.1038/s41598-022-26880-x

Compositional Evolution of Individual CoNPs on Co/TiO2 during CO and Syngas Treatment Resolved through Soft XAS/X-PEEM
Chengwu Qiu; Yaroslav Odarchenko; Qingwei Meng; Hongyang Dong; Ines Lezcano Gonzalez; Monik Panchal; Paul Olalde-Velasco; Francesco Maccherozzi; Laura Zanetti-Domingues; Marisa L. Martin-Fernandez et al.

Adam Milsom; Adam M. Squires; Andrew D. Ward; Christian Pfrang
Accounts of Chemical Research, DOI: 10.1021/acs.accounts.3c00194

Stephanie H. Jones; Martin D. King; Adrian R. Rennie; Andrew D. Ward; Richard A. Campbell; Arwel V. Hughes
The Journal of Physical Chemistry A, DOI: 10.1021/acs.jpca.3c03846​

Bolong Zhang, Kieran D. Richards, Beatrice E. Jones, Abigail R. Collins, Rosie Sanders, Sarah R. Needham, Pu Qian, Amoghavarsha Mahadevegowda, Caterina Ducati, Stanley Botchway, and Rachel C. Evans
Angew. Chem. Int. Ed. 2023, e202308602, https://doi.org/10.1002/anie.202308602​ 

Fletcher, E. M.Bateman, B. C.Botchway, S. W.Ward, A. D., & Sparkes, I. A.
Current Protocols, 3, e854. (2023) doi: 10.1002/cpz1.854

Connor R. Barker, Megan L. Poole, Matthew Wilkinson, James Morison, Alan Wilson, Gina Little,,Edward J. Stuckey, Rebecca J. L. Welbourn, Andrew D. Ward and  Martin D. King
Environ. Sci.: Atmos., 2023, 3, 1008, DOI: 10.1039/d3ea00005b

Dr. Hiwa K. Saeed, Dr. Paul J. Jarman, Dr. Sreejesh Sreedharan, Dr. Rachel Mowll, Alexander J. Auty, Adrien A. P. Chauvet, Prof. Carl G. W. Smythe, Dr. Jorge Bernardino de la Serna, Prof. Jim A. Thomas​
Chem.Eur. J., e2023006, DOI: https://doi.org/10.1002/chem.202300617

David T Hinds, Samir Adam Belhout, Paula E. Colavita, Andrew D. Ward, Susan J Quinn
Mater. Adv., 2023, DOI: 10.1039/D2MA00997H
Tara A. Eastwood, Karen Baker, Bree R. Streather, Nyasha Allen, Lin Wang, Stanley W. Botchway, Ian R. Brown, Jennifer R. Hiscock, Christopher Lennon, Daniel P. Mulvihill
Cell Reports Methods, 2023, 100396, ISSN 2667-2375, https://doi.org/10.1016/j.crmeth.2023.100396​

2022​​

​Structure and activity of particulate methane monooxygenase arrays in methanotrophs
Yanan Zhu, Christopher W. Koo, C. Keith Cassidy, Matthew C. Spink, Tao Ni, Laura C. Zanetti-Domingues, Benji Bateman, Marisa L. Martin-Ferna​​ndez, Juan Shen, Yuewen Sheng, Yun Song, Zhengyi Yang, Amy C. Rosenzweig & Peijun Zhang
Nat. Commun., 13, 5221 (2022). https://doi.org/10.1038/s41467-022-32752-9
​​Myosin VI regulates the spatial organisation of mammalian transcription initiation.
Yukti Hari-Gupta, Natalia Fili, Ália dos Santos, Alexander W. Cook, Rosemarie E. Gough, Hannah C. W. Reed, Lin Wang, Jesse Aaron, Tomas Venit, Eric Wait, Andreas Grosse-Berkenbusch, J. Christof M. Gebhardt, Piergiorgio Percipalle, Teng-Leong Chew, Marisa Martin-Fernandez & Christopher P. Toseland
Nature Communications, 2022. 13(1): p. 1346. DOI: https://doi.org/10.1038/s41467-022-28962-w 
Measuring Nuclear Organization of Proteins with STORM Imaging and Cluster Analysis, in Chromosome Architecture: Methods and Protocols
Ália dos Santos, Rosemarie E. Gough, Lin Wang & Christopher P. Toseland 
Springer US: New York, NY. p. 293-309, DOI: 10.1007/978-1-0716-2221-6_20​​
Binding partners regulate unfolding of myosin VI to activate the molecular motor
Dos Santos Á, Fili N, Hari-Gupta Y, Gough RE, Wang L, Martin-Fernandez M, Aaron J, Wait E, Chew TL, Toseland CP
Biochemical Journal, 479.13 (2022): 1409-1428.​ DOI: 10.1042/BCJ20220025​​
​Time-resolved infra-red studies of photo-excited porphyrins in the presence of nucleic acids and in HeLa tumour cells: insights into binding site and electron transfer dynamics
PM Keane, C Zehe, FE Poynton, SA Bright, S Estayalo-Adrián, SJ Devereux, PM Donaldson, IV Sazanovich, M Towrie, SW Botchway, CJ Cardin, DC Williams, T Gunnlaugsson, C Long, JM Kelly, SJ Quinn
Physical Chemistry Chemical Physics, PCCP, 08 Nov 2022, DOI: 10.1039/d2cp04604k PMID: 36345709 
​Methods for Detection of Protein Interactions with Plasmodesmata-Localized Reticulons
Kriechbaumer, V., Botchway, S.W.
Plasmodesmata. Methods in Molecular Biology, vol 2457. Humana, New York, NY. DOI: https://doi.org/10.1007/978-1-0716-2132-5_13
​SARS-CoV-2 and EBV; the cost of a second mitochondrial “whammy”?​
Nunn, A.V., Guy, G.W., Botchway, S.W. et al.
Immun. Ageing 18, 40 (2021). DOI: https://doi.org/10.1186/s12979-021-00252-x​
T​he guidance and adhesion protein FLRT2 dimerizes in cis via dual small-X3-small transmembrane motifs
Verity Jackson, Julia Hermann, Christopher J. Tynan, Daniel J. Rolfe, Robin A. Corey, Anna L. Duncan, Maxime Noriega, Amy Chu, Antreas C. Kalli, E. Yvonne Jones, Mark S.P. Sansom, Marisa L. Martin-Fernandez, Elena Seiradake, Matthieu Chavent
Structure, Volume 30, Issue 9, 2022, Pages 1354-1365.e5, ISSN 0969-2126, DOI: https://doi.org/10.1016/j.str.2022.05.014
Resolving the Effect of Oxygen Vacancies on Co Nanostructures Using Soft XAS/X-PEEM
Chengwu Qiu, Yaroslav Odarchenko, Qingwei Meng, Shaojun Xu, Ines Lezcano-Gonzalez, Paul Olalde-Velasco, Francesco Maccherozzi, Laura Zanetti-Domingues, Marisa Martin-Fernandez, and Andrew M. Beale
ACS Catalysis 2022 12 (15), 9125-9134 DOI: 10.1021/acscatal.2c00611
AR cooperates with SMAD4 to maintain skeletal muscle homeostasis
Forouhan M, Lim WF, Zanetti-Domingues LC, Tynan CJ, Roberts TC, Malik B, Manzano R, Speciale AA, Ellerington R, Garcia-Guerra A, Fratta P, Sorarú G, Greensmith L, Pennuto M, Wood MJA, Rinaldi C.
Acta Neuropathol. 2022 Jun;143(6):713-731. doi: 10.1007/s00401-022-02428-1. Epub 2022 May 6. PMID: 35522298; PMCID: PMC9107400.
​Instantaneous 4D micro‑particle image velocimetry (µPIV) via multifocal microscopy (MUM)​
M. G. R. Guastamacchia, R. Xue, K. Madi, W. T. E. Pitkeathly, P. D. Lee, S. E. D. Webb, S. H. Cartmell & P. A. Dalgarno​
Scientific Reports (2022) 12:18458 DOI: https://doi.org/10.1038/s41598-022-22701-3
​A perspective of fluorescence microscopy for cellular structural biology with EGFR as witness.
Martin-Fernandez, M. L.
Journal of Microscopy, 00, 1– 19. https://doi.org/10.1111/jmi.13151
​FRET-FLIM to Determine Protein Interactions and Membrane Topology of Enzyme Complexes​
Spatola Rossi, T., Pain, C., Botchway, S. W., & Kriechbaumer, V.

Current Protocols, 2, e598. DOI: https://doi.org/10.1002/cpz1.598​

​Inhibits CXCR4 Dynamics and CXCL12-Mediated Directed Cell Migration in Human T Cells.
Gardeta SR, Garc´ıa-Cuesta EM, D’Agostino G, Soler Palacios B, Quijada-Freire A, Lucas P, Bernardino de la Serna J, Gonzalez-Riano C, Barbas C, Rodr´ıguez-Frade JM and Mellado M.

​Front. Immunol. 13:925559. doi: 10.3389/fimmu.2022.925559

​Identification of a New Cholesterol-Binding Site within the IFN-γ Receptor that is Required for Signal Transduction
Morana, O., Nieto-Garai, J. A., Björkholm, P., Bernardino de la, J., Terrones, O., Arboleya, A., Ciceri, D., Rojo-Bartolomé, I., Blouin, C. M., Lamaze, C., Lorizate, M., Contreras, F.-X.,
Adv. Sci. 2022, 9, 2105170. https://doi.org/10.1002/advs.202105170
In Situ Sol–Gel Synthesis of Unique Silica Structures Using Airborne Assembly: Implications for In-Air Reactive Manufacturing
Connor R. Barker, Francesca K. Lewns, Gowsihan Poologasundarampillai, and Andrew D. Ward
ACS Appl. Nano Mater. 2022, 5, 8, 11699–11706, DOI: https://doi.org/10.1021/acsanm.2c02683
​The impact of molecular self-organisation on the atmospheric fate of a cooking aerosol proxy
Adam Milsom, Adam M. Squires, Andrew D. Ward, and Christian Pfrang
Atmos. Chem. Phys., 22, 4895–4907, 2022 DOI: https://doi.org/10.5194/acp-22-4895-2022
​Mie scattering from optically levitated mixed sulfuric acid–silica core–shell aerosols: observation of core–shell morphology for atmospheric science
Megan R. McGrory, Rosalie H. Shepherd, Martin D. King, Nicholas Davidson, Francis D. Pope, I. Matthew Watson, Roy G. Grainger, Anthony C. Jones and  Andrew D. Ward  ​
Phys. Chem. Chem. Phys., 2022,24, 5813-5822, DOI: https://doi.org/10.1039/D1CP04068E
Measurement of gas-phase OH radical oxidation and film thickness of organic films at the air–water interface using material extracted from urban, remote and wood smoke aerosol
Rosalie H. Shepherd, Martin D. King, Adrian R. Rennie, Andrew D. Ward, Markus M. Frey, Neil Brough, Joshua Eveson, Sabino Del Vento, Adam Milsom, Christian Pfrang, Maximilian W. A. Skoda and Rebecca J. L. Welbourn
Environ. Sci.: Atmos., 2022,2, 574-590, DOI: https://doi.org/10.1039/D2EA00013J

​​2021​​

​​
Correlative multi-scale cryo-imaging unveils SARS-CoV-2 assembly and​​ egress
Luiza Mendonça, Andrew Howe, James B. Gilchrist, Yuewen Sheng, Dapeng Sun, Michael L. Knight, Laura C. Zanetti-Domingues, Benji Bateman, Anna-Sophia Krebs, Long Chen, Julika Radecke, Vivian D. Li, Tao Ni, Ilias Kounatidis, Mohamed A. Koronfel, Marta Szynkiewicz, Maria Harkiolaki, Marisa L. Martin-Fernandez, William James & Peijun Zhang
Nature Communications volume 12, Article number: 4629 (2021); DOI: https://doi.org/10.1038/s42003-020-0872-x

​A Dinuclear Osmium(II) Complex Near-Infrared Nanoscopy Probe for Nuclear DNA
Fabian Dröge, Felicity F. Noakes, Stuart A. Archer, Sreejesh Sreedharan, Ahtasham Raza, Craig C. Robertson, Sheila MacNeil, John W. Haycock, He​ather Carson, Anthony J. H. M. Meijer, Carl G. W. Smythe, Jorge Bernardino de la Serna, Benjamin Dietzek-Ivanšić, and Jim A. Thomas
Journal of the American Chemical Society 2021 143 (48), 20442-20453 DOI: 10.1021/jacs.1c10325
Miro2 tethers the ER to mitochondria to promote mitochondrial fusion in tobacco leaf epiderma
Rhiannon R. White, Congping Lin, Ian Leaves, Inês G. Castro, Jeremy Metz, Benji C. Bateman, Stanley W. Botchway, Andrew D. Ward, Peter Ashwin & Imogen Sparkes
Communications Biology volume 3, Article number: 161 (2020); DOI: https://doi.org/10.1038/s42003-020-0872-x
​​​​​The persistence of a proxy for cooking emissions in megacities: a kinetic study of the ozonolysis of self-assembled films by simultaneous small and wide angle X-ray scattering (SAXS/WAXS) and Raman microscopy
Adam Milsom, Adam M. Squires, Ben Woden, Nicholas J. Terrill, Andrew D. Ward and Christian Pfrang

Faraday discussionsDOI: https://doi.org/10.1039/D0FD00088D
Super-Resolution Microscopy Using a Bioorthogonal-Based Cholesterol Probe Provides Unprecedented Capabilities for Imaging Nanoscale Lipid Heterogeneity in Living Cells
Maier Lorizate, Oihana Terrones, Jon Ander Nieto-Garai, Iratxe Rojo-Bartolomé, Dalila Ciceri, Ornella Morana, June Olazar-Intxausti, Aroa Arboleya, Alexia Martin, Marta Szynkiewicz, Maria Calleja-Felipe, Jorge Bernardino de la Serna and F.-Xabier Contreras
Small Methods; DOI: https://doi.org/10.1002/smtd.202100430
Multi-dimensional and spatiotemporal correlative imaging at the plasma membrane of live cells to determine the continuum nano-to-micro scale lipid adaptation and collective motion
Miguel Bernabé-Rubioab, Minerva Bosch-Forteaac, Miguel A. Alonsoa, Jorge ​Bernardino de la Serna
Adaptive Lipid Immiscibility and Membrane Remodeling Are Active Functional Determinants of Primary Ciliogenesis
Miguel Bernabé-Rubio, Minerva Bosch-Fortea, Esther García, Jorge Bernardino de la Serna, Miguel A. Alonso​
Small MethodsDOI: https://doi.org/10.1002/smtd.202000711
Real-time imaging and analysis of cell-hydrogel interplay within an extrusion-bioprinting capillary
Gowsihan Poologasundarampillai, Abdelrahman Haweet, Soher Nagi Jayash, George Morgan, James E. Moore Jr, Alessia Candeo Bioprinting, Volume 23, 12 April 2021; DOI: https://doi.org/10.1016/j.bprint.2021.e00144
Combining Multicolor FISH with Fluorescence Lifetime Imaging for Chromosomal Identification and Chromosomal Sub Structure Investigation
Archana Bhartiya, Ian Robinson, Mohammed Yusuf and Stanley W. Botchway
​Frontiers in Molecular Biosciences 8, 85, 2021; DOI: https://doi.org/10.3389/fmolb.2021.631774
Structural Investigations, Cellular Imaging, and Radiolabeling of Neutral, Polycationic, and Polyanionic Functional Metalloporphyrin Conjugates
Valeria Ciaffaglione, Philip A. Waghorn, Rüdiger M. Exner, Fernando Cortezon-Tamarit, Samuel P. Godfrey, Sophia Sarpaki, Helena Quilter, Ruggero Dondi, Haobo Ge, Gabriele Kociok-Kohn, Stanley W. Botchway, Ian M. Eggleston, Jonathan R. Dilworth, and Sofia I. Pascu
Bioconjugate Chemistry 2021; DOI: https://doi.org/10.1021/acs.bioconjchem.0c00691
Multicolor FRET-FLIM Microscopy to Analyze Multiprotein Interactions in Live Cells
Ahmed A., Schoberer J., Cooke E., Botchway S.W.
Multiprotein Complexes, Methods in Molecular Biology, vol 2247. Humana, New York, NY; DOI: https://doi.org/10.1007/978-1-0716-1126-5_16​​
Singlet Exciton Fission and Associated Enthalpy Changes with a Covalently Linked Bichromophore Comprising TIPS-Pentacenes Held in an Open Conformation
Joshua K. G. Karlsson, Alparslan Atahan, Anthony Harriman, Nikolai V. Tkachenko, Andrew D. Ward, Fabio A. Schaberle, Carlos Serpa and Luis G. Arnaut
J. Phys. Chem. A. 2021, 125, 5, 1184–1197; DOI: https://doi.org/10.1021/acs.jpca.0c09961​
A Targeted and Tuneable DNA Damage Tool Using CRISPR/Cas9
Ioannis Emmanouilidis, Natalia Fili, Alexan​der W. Cook, Yukti Hari-Gupta, Ália dos Santos, Lin Wang, Marisa L. Martin-Fernandez, Peter J. I. Ellis and Christopher P. Toseland
Biomolecules 2021, 11(2), 288; DOI: https://doi.org/10.3390/biom11020288
Serial cryoFIB/SEM Reveals Cytoarchitectural Disruptions in Leigh Syndrome Patient Cells
Yanan Zhu, Dapeng Sun, Andreas Schertel, Jiying Ning, Xiaofeng Fu, Pam Pam Gwo, Alan M Watson, Laura C Zanetti-Domingues, Marisa L Martin-Fernandez, Zachary Freyberg, Peijun Zhang​
Structure Volume 29, Issue 1, 7 January 2021; DOI: 10.1016/j.str.2020.10.003

2020​​​​​​​


​​The reaction of oleic acid monolayers with gas-phase ozone at the air water interface: the effect of sub-phase viscosity, and inert secondary components†

Martin D. King, Stephanie H. Jones, Claire O. M. Lucas, Katherine C. Thompson, Adrian R. Rennie, Andrew D. Ward, Amelia A. Marks, Fleur N. Fisher, Christian Pfrang, Arwel V. Hughesf and Richard A. Campbell

Phys. Chem. Chem. Phys., 2020,22, 28032-28044DOI https://doi.org/10.1039/D0CP03934A

​​​​

​​SARS-CoV-2 and mitochondrial health: implications of lifestyle and ageing

 Alistair V. W. Nunn, Geoffrey W. Guy, Wolfgang Brysch, Stanley W. Botchway, Wayne Frasch, Edward J. Calabrese & Jimmy D. Bell

 ​Immunity & Ageing 17, 3​3 (2020). https://doi.org/10.1186/s12979-020-00204-x​



Zanetti-Domingues, L.C.; Bonner, S.E.; Martin-Fernandez, M.L.; Huber, V. 
Cells 2020, 9, 2505.​

Zanetti-Domingues, L.C.; Bonner, S.E.; Iyer, R.S.; Martin-Fernandez, M.L.; Huber, V. 
Cells 2020, 9, 2639.


Ália dos Santos, Alexander W Cook, Rosemarie E Gough, Martin Schilling, Nora A Olszok, Ian Brown, Lin Wang, Jesse Aaron, Marisa L Martin-Fernandez, Florian Rehfeldt, Christopher P Toseland​
Nucleic Acids Research, gkaa1202, https://doi.org/10.1093/nar/gkaa1202


Directly imaging the localisation and photosensitization properties of the pan-mTOR inhibitor, AZD2014, in living cancer cells

Abdullah R. Ahmed, AlessiaCandeo, Sofia D'Abrantes, Sarah R. Needham, Rahul B. Yadav, Stanley W. Botchway, Anthony W.Parker
Journal of Photochemistry and Photobiology B: Biology, Volume 213, December 2020, 112055; https://doi.org/10.1016/j.jphotobiol.2020.112055

Megan R. McGrory, Martin D. King and Andrew D. Ward
J. Phys. Chem. A 2020; https://doi.org/10.1021/acs.jpca.0c06121

 

Yanan Zhu, Dapeng Sun, Andreas Schertel, Jiying Ning, Xiaofeng Fu, Pam Pam Gwo, Alan M. Watson, Laura C. Zanetti-Domingues, Marisa L. Martin-Fernandez, Zachary Freyberg, Peijun Zhang
Structure, 2020​; https://doi.org/10.1016/j.str.2020.10.003

The smfBox is an open-source platform for single-molecule FRET

Benjamin Ambrose, James M. Baxter, John Cully, Matthew Willmott, Elliot M. Steele, Benji C. Bateman, Marisa L. Martin-Fernandez, Ashley Cadby, Jonathan Shewring, Marleen Aaldering & Timothy D. Craggs​

Nature Communications volume 11, Article number: 5641 (2020); https://doi.org/10.1038/s41467-020-19468-4


Marisa L Martin-Fernandez​

Journal of Microscopy, Vol. 00, Issue 0 2020, pp. 1–13 ​DOI: 10.1111/jmi.12974


Amy E. Danson, Alex McStea, Lin Wang, Alice Y. Pollitt, Marisa L. Martin-Fernandez, Isabel Moraes, Martin A. Walsh, Sheila MacIntyre and Kimberly A. Watson
Biology 2020, 9(10), 344; https://doi.org/10.3390/biology9100344

Luis M. Magno, David T. Hinds, Paul Duffy, Rahul. B. Yadav, Andrew D. Ward, Stan W. Botchway, Paula E. Colavita and Susan J. Quinn
Front. Chem., 14 October 2020 | https://doi.org/10.3389/fchem.2020.576175

Adam Milsom , Adam M Squires , Ben Woden , Nick J Terrill , Andrew D. Ward and Christian Pfrang
Royal Society of Chemistry, Faraday Discuss. (2020), DOI: 10.1039/D0FD00088D

​​Mononuclear ruthenium(II) theranostic complexes that function as broad-spectrum antimicrobials in therapeutically resistant pathogens through interaction with DNA

​Kirsty L. Smitten, Eleanor J. Thick, Hannah M. Southam, Jorge Bernardino de la Serna, Simon J. Foster ​​and Jim A. Thomas 
​Chem. Sci., 2020, 11, 8828-8838; DOI: 10.1039/D0SC03410J

​​Actin reorganization at the centrosomal area and the immune synapse regulates polarized secretory traffic of multivesicular bodies in T lymphocytes

Ana Bello-Gamboa, Marta ​Velasco, Solange Moreno, Gonzalo Herranz, Roxana Ilie, Silvia Huetos, Sergio Dávila, Alicia Sánchez, Jorge Bernardino De La Serna, Víctor Calvo & Manuel Izquierdo
Journal of Extracellular Vesicles 9 (1), 1759926; https://doi.org/10.1080/20013078.2020.1759926​

A. Colomba; M. Fitzek; R. George; G. Weitsman; S. Roberts; L. Zanetti-Domingues; M. Hirsch; D. Rolfe; S. Mehmood; A. Madin; J. Claus; S. Kjær; A. P. Snijders; T. Ng; M. Martin-Fernandez; D. Smith; P. J. Parker​​
Biochem J (2020) BCJ20200496, https://doi.org/10.1042/BCJ20200496

Measurement of the fluorescence lifetime of GFP in high refractive index levitated droplets using FLIM

N. M. ​Davidson, P. J. Gallimore, B. Bateman, A. D. Ward, S. W. Botchway, M. Kalberer, M. K. Kuimova and  F. D. Pope.

Schaberle, F.A.; Serpa, C.; Arnaut, L.G.; Ward, A.D.; Karlsson, J.K.G.; Atahan, A.; Harriman, A.
Chemistry 2020, 2, 545-564

A Dinuclear Ruthenium(II) Complex Excited by Near-Infrared Light Through Two-Photon Absorption Induces Phototoxicity Deep Within Hypoxic Regions of Melanoma Cancer Spheroids

Raza A, Archer SA, Fairbanks SD, Smitten KL, Botchway SW, Thomas JA, MacNeil S, Haycock JW.
J Am Chem Soc. (2020) Mar 11;142(10) DOI: 4639-4647


AVW Nunn, GW Guy, SW Botchway, JD Bell
Phytotherapy Research (2020) John Wiley & Sons, Ltd. DOI: 10.1002/ptr.6654


Rhiannon R. White, Congping Lin, Ian Leaves, Inês G. Castro, Jeremy Metz, Benji C. Bateman, Stanley W. Botchway, Andrew D. Ward, Peter Ashwin & Imogen Sparkes
Communications Biology volume 3, Article number: 161 (2020) DOI: s42003-020-0872-x

Samantha C. Salvage, Johanna S Rees, Alexandra McStea, Michael Hirsch, Lin Wang, Chris Tynan, Matthew W. Reed, Jennifer R. Irons, Richard Butler, Andrew J. Thompson, Marisa L. Martin-Fernandez, Christopher LH. Huang, Antony P. Jackson.
Faseb J. (2020) DOI: 10.1096/fj.201701473RR

Natalia Fili, Yukti Hari-Gupta, Bjork Aston, Ália dos Santos, Rosemarie E Gough, Bana Alamad, Lin Wang, Marisa L. Martin-Fernandez & Christopher P. Toseland.
J Biol Chem (2020) DOI: 10.1074/jbc.RA119.010142

Hiwa K. Saeed, Sreejesh Sreedharan, Paul J. Jarman, Stuart A. Archer, Simon D. Fairbanks, Simon P. Foxon, Alexander J. Auty, Dimitri Chekulaev, Theo Keane, Anthony J. H. M. Meijer, Julia ​A. Weinstein, Carl G. W. Smythe, Jorge Bernardino de la Serna, Jim A. Thomas*
J. Am. Chem. Soc. (2020) DOI: 142, 2, 1101-1111

Kirsty L. Smitten, Simon D. Fairbanks, Craig C. Robertson, Jorge Bernardino de la Serna, Simon J. Foster, Jim A. Thomas
Chemical Science, Issue 1 2020 https://doi.org/10.1039/C9SC04710G

2019​​​​​​​


Nanoscale. 2019 May 16;11(19):9498-9507. doi: 10.1039/c8nr10344e. PMID: 31046042

Directed Molecular Stacking for Engineered Fluorescent Three‐Dimensional Reduced Graphene Oxide and Coronene Frameworks
Mao B, Cortezon-Tamarit F, Ge H, Kuganathan N, Mirabello V, Palomares FJ, Kociok-Köhn G, Botchway SW, Calatayud DG, Pascu SI. ChemistryOpen. 2019 Dec 4;8(12):1383-1398. https://doi.org/10.1002/open.201900310
Graham AD, Pandey R, Tsancheva VS, Candeo A, Botchway SW, Allan AJ, Teboul L, Madi K, Babra TS, Zolkiewski LAK, Xue X, Bentley L, Gannon J, Olof SN, Cox RD.
IOP Publishing Ltd, 2019 Dec 11;12(1):015018.

Kirsty L. Smitten, Hannah M. Southam, Jorge Bernardino de la Serna, Martin R. Gill, Paul J. Jarman, Carl G. W. Smythe, Robert K. Poole, Jim A. Thomas
ACS Nano 2019, 13, 5, 5133-5146


Super-Resolution Microscopy Reveals Shape and Distribution of Dislocations in Single-Crystal Nanocomposites
Johannes Ihli, David C. Green, Christophe Lynch, Mark A. Holden, Phillip A. Lee, Shuheng Zhang, Ian K. Robinson, Stephen E. D. Webb, and Fiona C. Meldrum
Angew. Chem. Int. Ed. 2019, 58, 17328–17334 DOI: 10.1002/anie.201905293.


Super-resolution Microscopy at Cryogenic Temperatures Using Solid Immersion Lenses
Bateman, B. C., Zanetti-Domingues, L. C., Moores, A. N., Needham, S. R., Rolfe, D. J., Wang, L., Clarke, D. T. and Martin-Fernandez, M. L.​​
Bio-protocol 9(22): e3426. DOI: 10.21769/BioProtoc.3426. November 2019​


A global sampler of si​ngle particle tracking solutions for single molecule microscopy
Michael Hirsch, Richard Wareham, Ji W. Yoon, Daniel J. Rolfe , Laura C. Zanetti-Domingues, Michael P. Hobson, Peter J. Parker, Marisa L. Martin-Fernandez, Sumeetpal S. Singh
PLOS ONE, https://doi.org/10.1371/journal.pone.0221865, October 2019​


A highly dynamic F-actin network regulates transport and recycling of micronemes in Toxoplasma gondii vacuoles
Javier Periz, Mario Del Rosario, Alexandra McStea, Simon Gras, Colin Loney, Lin Wang, Marisa L. Martin-Fernandez & Markus Meissner ​​​​
Nature Communications 10(1), DOI: 10.1038/s41467-019-12136-2​


The cell wall regulates dynamics and size of plasma-membrane nanodomains in Arabidopsis
J. F. McKenna, D. J. Rolfe, S. E. D. Webb, A. F. Tolmie, S. W. Botchway, M. L. Martin-Fernandez, C. Hawes, and J. Runions
PNAS June 25, 2019 116 (26) 12857-12862


A Brief History of Single-Particle Tracking of the Epidermal Growth Factor Receptor
David T. Clarke and Marisa L. Martin-Fernandez
Methods and Protocols​ DOI: 10.3390/mps2010012


Preparation of polymer gold nanoparticle composites with tunable plasmon coupling and their application as SERS substrates
S. A. A. Belhout, F.R. Baptista, S. J. Devereux, A. W. Parker, A. D. Ward and S. J. Quinn
Nanoscale, 2019, DOI: 10.1039/C9NR05014K​


A signal motif retains Arabidopsis ER-α-mannosidase I in the cis-Golgi and prevents enhanced glycoprotein ERAD
Schoberer J, König J, Veit C, Vavra U, Liebminger E, Botchway SW, Altmann F, Kriechbaumer V, Hawes C, Strasser R.
Nat Commun. 2019 Aug 16;10(1):3701. doi: 10.1038/s41467-019-11686-9


Candidalysin ac​​tivates innate epithelial immune responses via epidermal growth factor receptor
Jemima Ho, Xuexin Yang, Spyridoula-Angeliki Nikou, Nessim Kichik, Andrew Donkin, Nicole O. Ponde, Jonathan P. Richardson, Remi L. Gratacap, Linda S. Archambault, Christian P. Zwirner, Celia Murciano, Rhonda Henley-Smith, Selvam Thavaraj, Christopher J. Tynan, Sarah L. Gaffen, Bernhard Hube, Robert T. Wheeler, David L. Moyes & Julian R. Naglik.
Nat. Commun. 2019 May 24, 10, 2297. doi: 10.1038/s41467-019-09915-2


Manipulation and Deposition of Complex, Functional Block Copolymer Nanostructures Using Optical Tweezers
Gould OEC, Box SJ, Boott CE, Ward AD, Winnik MA, Miles MJ, Manners, I.
ACS NANO Volume: 13 Issue: 4 Pages: 3858-3866 DOI: 10.1021/acsnano.9b00342 APR 2019


Solid immersion​​​ microscopy images cells under cryogenic conditions with 12 nm resolution
Lin Wang, Benji Bateman, Laura C. Zanetti-Domingues, Amy N. Moores, Sam Astbury, Christopher Spindloe, Michele C. Darrow, Maria Romano, Sarah R. Needham, Konstantinos Beis, Daniel J. Rolfe, David T. Clarke & Marisa L. Martin-Fernandez
Nature Communications Biology Volume 2, Article number: 74


Structure and Dynamics of the EGF Receptor as Revealed by Experiments and Simulations and Its Relevance to Non-Small Cell Lung Cancer
Marisa L. Martin-Fernandez, David T. Clarke, Selene K. Roberts, Laura C. Zanetti-Domingues and Francesco L. Gervasio
Cells 2019, 8(4), 316; https://doi.org/10.3390/cells8040316


​​​​The Rho family GEF FARP2 is activated by aPKCι to control tight junction formation and polarity
Ahmed Elbediwy, Yixiao Zhang, Mathias Cobbaut, Philippe Riou, Ray S. Tan, Selene K. Roberts, Chris Tynan, Roger George, Svend Kjaer, Marisa L. Martin-Fernandez, Barry J. Thompson, Neil Q. McDonald, Peter J. Parker
J Cell Sci 2019 132: jcs223743 doi: 10.1242/jcs.223743


Golgi localization of GnTI requires a polar amino acid residue within its transmembrane domain.
Schoberer J, Liebminger E, Vavra U, Veit C, Grünwald-Gruber C, Altmann F, Botchway SW, Strasser R.
Plant Physiol. 2019 Apr 10. pii: pp.00310.2019. doi: 10.1104/pp.19.00310. [Epub ahead of print]


Ataxia-Telangiectasia Mutated is located in cardiac mitochondria and impacts oxidative phosphorylation.
Blignaut M, Loos B, Botchway SW, Parker AW, Huisamen B.
Sci Rep. 2019 Mar 18;9(1):4782. doi: 10.1038/s41598-019-41108-1.


DNA DSB Repair Dynamics following Irradiation with Laser-Driven Protons at Ultra-High Dose Rates.
Hanton F, Chaudhary P, Doria D, Gwynne D, Maiorino C, Scullion C, Ahmed H, Marshall T, Naughton K, Romagnani L, Kar S, Schettino G, McKenna P, Botchway S, Symes DR, Rajeev PP, Prise KM, Borghesi M.
Sci Rep. 2019 Mar 14;9(1):4471. doi: 10.1038/s41598-019-40339-6.


Direct imaging of the recruitment and phosphorylation of S6K1 in the mTORC1 pathway in living cells.
Ahmed AR, Owens RJ, Stubbs CD, Parker AW, Hitchman R, Yadav RB, Dumoux M, Hawes C, Botchway SW.
Sci Rep. 2019 Mar 4;9(1):3408. doi: 10.1038/s41598-019-39410-z.


Controlling the fluorescence and room-temperature phosphorescence behaviour of carbon nanodots with inorganic crystalline nanocomposites.
Green DC, Holden MA, Levenstein MA, Zhang S, Johnson BRG, Gala de Pablo J, Ward A, Botchway SW, Meldrum FC.
Nat Commun. 2019 Jan 14;10(1):206. doi: 10.1038/s41467-018-08214-6.

2018​​​​​


The Role of PEG-40-stearate in the Production, Morphology, and Stability of Microbubbles

J. Owen, S. Kamila, S. Shrivastava, D. Carugo, J. Bernardino de la Serna, C. Mannaris, V. Pereno, R. Browning, E. Beguin, A.P. McHale, J.F. Callan, and E. Stride.​
Langmuir DOI:10.1021/acs.langmuir.8b02516​


A tumor-targeted 4-1BB agonistic trimerbodies induces potent anti-tumor immunity without systemic toxicity
Highlights article: https://acir.org/journal-articles/experimental-immunotherapy/immunotherapy-design?entryId=19980​

M Compte, S L Harwood, I Muñoz, R Navarro, M Zonca, G Perez-Chacón, A Erce-Llamazares, N Merino, A Tapia-Galisteo, Á M Cuesta, K Mikkelsen, E Caleireas, N Nuñez-Prado, M A Aznar, S Lykkemark, , J. Marínez-Torrecuadrada, I Melero, F. J. Blanco, J Bernardino de la Serna, J. M. Zapata, L. Sanz, L Alvarez-Vallina.
Nature Communications DOI: 10.1038/s41467-018-07195-w​


Nanoscale Spatiotemporal Diffusion Modes Measured by Simultaneous Confocal and Stimulated Emission Depletion Nanoscopy Imaging

F. Schneider, D. Waithe, S. Galiani, J. Bernardino de la Serna, E. Sezgin*, C. Eggeling*.
Nano Letters, DOI: 10.1021/acs.nanolett.8b01190​


The architecture of EGFR's basal complexes reveals autoinhibition mechanisms in dimers and oligomers.
Laura C. Zanetti-Domingues, Dimitrios Korovesis, Sarah R. Needham, Christopher J. Tynan, Shiori Sagawa, Selene K. Roberts, Antonija Kuzmanic, Elena Ortiz-Zapater, Purvi Jain, Rob C. Roovers, Alireza Lajevardipour, Paul M.P. van Bergen en Henegouwen, George Santis, Andrew H.A. Clayton, David T. Clarke, Francesco L. Gervasio, Yibing Shan, David E. Shaw, Daniel J. Rolfe, Peter J. Parker, and Marisa L. Martin-Fernandez. ​
Nat Comms (2018) DOI:10.1038/s41467-018-06632-0.


Cluster Analysis of Endogenous HER2 and HER3 Receptors in SKBR3 Cells
Selene K. Roberts, Michael Hirsch, Alexandra McStea, Laura C. Zanetti-Domingues, David T. Clarke, Jeroen Claus, Peter J. Parker, Lin Wang, Marisa L. Martin-Fernandez
Bio-p​rotocol 10.21769/BioProtoc.3096


Iridium Nanoparticles for Multichannel Luminescence Lifetime Imaging, Mapping Localization in Live Cancer Cells.
King SM, Claire S, Teixeira RI, Dosumu AN, Carrod AJ, Dehghani H, Hannon MJ, Ward AD, Bicknell R, Botchway SW, Hodges NJ, Pikramenou Z.
J Am Chem Soc. 2018 Aug 15;140(32):10242-10249. doi: 10.1021/jacs.8b05105. Epub 2018 Aug 2. PMID: 30032598 [PubMed - in process]


Synthesis, Radiolabelling and In Vitro Imaging of Multifunctional Nanoceramics.
Lledos M, Mirabello V, Sarpaki S, Ge H, Smugowski HJ, Carroll L, Aboagye EO, Aigbirhio FI, Botchway SW, Dilworth JR, Calatayud DG, Plucinski PK, Price GJ, Pascu SI.
ChemNanoMat. 2018 Apr;4(4):361-372. doi: 10.1002/cnma.201700378. Epub 2018 Feb 8. PMID: 29938196 [PubMed] Free PMC Article


High-resolution μCT of a mouse embryo using a compact laser-driven X-ray betatron source.
Cole JM, Symes DR, Lopes NC, Wood JC, Poder K, Alatabi S, Botchway SW, Foster PS, Gratton S, Johnson S, Kamperidis C, Kononenko O, De Lazzari M, Palmer CAJ, Rusby D, Sanderson J, Sandholzer M, Sarri G, Szoke-Kovacs Z, Teboul L, Thompson JM, Warwick JR, Westerberg H, Hill MA, Norris DP, Mangles SPD, Najmudin Z.
ChemNanoMat. 2018 Apr;4(4):361-372. doi: 10.1002/cnma.201700378. Epub 2018 Feb 8. PMID: 29938196 [PubMed] Free PMC Article


Correction to Multimodal Probes: Superresolution and Transmission Electron Microscopy Imaging of Mitochondria, and Oxygen Mapping of Cells, Using Small-Molecule Ir(III) Luminescent Complexes.
Shewring JR, Cankut AJ, McKenzie LK, Crowston BJ, Botchway SW, Weinstein JA, Edwards E, Ward MD.
Sci Rep. 2018 Feb 2;8(1):2310. doi: 10.1038/s41598-018-20840-0. PMID: 29396477 [PubMed - in process] Free PMC Article


Using Optical Tweezers Combined with Total Internal Reflection Microscopy to Study Interactions Between the ER and Golgi in Plant Cells.
Sparkes I, White RR, Coles B, Botchway SW, Ward A.
Methods Mol Biol. 2018;1691:167-178. doi: 10.1007/978-1-4939-7389-7_13.
Super-Resolution Nanoscopy Imaging Applied to DNA Double-Strand Breaks.
D'Abrantes S, Gratton S, Reynolds P, Kriechbaumer V, McKenna J, Barnard S, Clarke DT, Botchway SW.
Radiat Res. 2018 Jan;189(1):19-31. doi: 10.1667/RR14594.1. Epub 2017 Oct 20
Metabolons on the Plant ER.
Kriechbaumer V, Botchway SW.
Methods Mol Biol. 2018;1691:159-166. doi: 10.1007/978-1-4939-7389-7_12.

Determination of the refractive index of insoluble organic extracts from atmospheric aerosol over the visible wavelength range using optical tweezers
Rosalie H. Shepherd, Martin D. King, Amelia A. Marks, Neil Brough, and Andrew D. Ward1
Atmospheric Chemistry and Physics


1064 nm Dispersive Raman Microspectroscopy and Optical Trapping of Pharmaceutical Aerosols
Peter J. Gallimore, Nick M. Davidson, Markus Kalberer, Francis D. Pope, and Andrew D. Ward
Analytical Chemistry


Inhibitor-induced HER2-HER3 heterodimerisation promotes proliferation through a novel dimer interface
Jeroen Claus, Gargi Patel, Flavia Autore, Audrey Colomba, Gregory Weitsman, Tanya N Soliman, Selene Roberts, Laura C Zanetti-Domingues, Michael Hirsch, Francesca Collu, Roger George, Elena Ortiz-Zapater, Paul R Barber, Boris Vojnovic, Yosef Yarden, Marisa L Martin-Fernandez, Angus Cameron, Franca Fraternali, Tony Ng, Peter J Parker
eLIFE doi: 10.7554/eLife.32271


Orchestrated control of filaggrin-actin scaffolds underpins cornification

D Gutowska-Owsiak, J Bernardino de la Serna, M Fritzsche, A Naeem, E Podobas, M Leeming, H Colin-York, R O'Shaughnessy, C Eggeling, and G Ogg
Cell Death and Disease, 9:412


Dissecting single–cell molecular spatiotemporal mobility and clustering at Focal Adhesions in polarised cells by fluorescence fluctuation spectroscopy methods
Esther Garcia, Jorge Bernardino de la Serna
Methods, DOI:10.1016/j.ymeth.2018.03.008
The odd one out: Arabidopsis reticulon 20 does not bend ER membranes but has a role in lipid regulation.
Kriechbaumer V, Maneta-Peyret L, Fouillen L, Botchway SW, Upson J, Hughes L, Richardson J, Kittelmann M, Moreau P, Hawes C.
Sci Rep. 2018 Feb 2;8(1):2310. doi: 10.1038/s41598-018-20840-0.

2017​​


Affimer proteins are versatile and renewable affinity reagents 
Christian Tiede, Robert Bedford, Sophie J Heseltine, Gina Smith, Imeshi Wijetunga, Rebecca Ross, Danah AlQallaf, Ashley PE Roberts, Alexander Balls, Alistair Curd, Ruth E Hughes, Heather Martin, Sarah R Needham, Laura C Zanetti-Domingues, Yashar Sadigh, Thomas P Peacock, Anna A Tang, Naomi Gibson, Hannah Kyle, Geoffrey W Platt, Nicola Ingram, Thomas Taylor, Louise P Coletta, Iain Manfield, Margaret Knowles, Sandra Bell, Filomena Esteves, Azhar Maqbool, Raj K Prasad, Mark Drinkhill, Robin S Bon, Vikesh Patel, Sarah A Goodchild, Marisa Martin-Fernandez, Ray J Owens, Joanne E Nettleship, Michael E Webb, Michael Harrison, Jonathan D Lippiat, Sreenivasan Ponnambalam, Michelle Peckham, Alastair Smith, Paul Ko Ferrigno, Matt Johnson, Michael J McPherson, Darren Charles Tomlinson
eLIFE Jun 27, 2017


Optimized processing and analysis of conventional confocal microscopy generated scanning FCS data
D Waithe, F Schneider, J Chojnacki, MP. Clausen, D Shrestha, J. Bernardino de la Serna, C. Eggeling
Methods, DOI:10.1016/j.ymeth.2017.09.010
Multimodal super-resolution optical microscopy using a transition metal-based probe provides unprecedented capabilities for imaging both nuclear chromatin and mitochondria
S Sreedharan, MR Gill, E Garcia, H K Saeed, D Robinson, A Byrne, A Cadby, T E. Keyes, C Smythe, P Pellett, J Bernardino de la Serna, and J A Thomas
JACS DOI: 10.1021/jacs.7b08772
Lysosomal tracking with a cationic naphthalimide using multiphoton fluorescence lifetime imaging microscopy.
Li M, Ge H, Mirabello V, Arrowsmith RL, Kociok-Köhn G, Botchway SW, Zhu W, Pascu SI, James TD.
2017 Oct 18;53(81):11161-11164. doi: 10.1039/c7cc05166b. Epub 2017 Sep 22.
Oxygen Mapping of Melanoma Spheroids using Small Molecule Platinum Probe and Phosphorescence Lifetime Imaging Microscopy.
Raza A, Colley HE, Baggaley E, Sazanovich IV, Green NH, Weinstein JA, Botchway SW, MacNeil S, Haycock JW.
Sci Rep. 2017 Sep 6;7(1):10743. doi: 10.1038/s41598-017-11153-9.
Stacks off tracks: a role for the golgin AtCASP in plant endoplasmic reticulum-Golgi apparatus tethering
Osterrieder A, Sparkes IA, Botchway SW, Ward A, Ketelaar T, de Ruijter N, Hawes C.
J Exp Bot. 2017 Jun 15;68(13):3339-3350. doi: 10.1093/jxb/erx167.
Cytoskeletal actin dynamics shape a ramifying actin network underpinning immunological synapse formation
M. Fritzsche*, R. Fernandes*, V.T. Chang, H. Colin-York, M.P. Clausen, J.H. Felce, S. Galiani, C. Erlenkämper, M. Santo, J.M. Heddleston, D. Waithe, J. Bernardino de la Serna, B.C. Lagerholm, T.-L. Liu, T.L. Chew, E. Betzig, S.J. Davis, and C. Eggeling
Science Advances 3 (6), e1603032
Spectral Imaging Toolbox
M Aron, R Browning, D Carugo, E Sezgin, J Bernardino de la Serna, C Eggeling, and E Stride
BMC Bioinformatics 18 (1), 254
Fluorescence Lifetime Imaging and Super resolution microscopies shed light into the self-assembly of functional porphyrins on insulating surfaces
B. Mao, DG. Calatayud, V Mirabello, H Ge, BJ. Hodges, RMJ. Jacobs, AM. Shepherd, JA Ribeiro Martins, N Kuganathan, J. Bernardino de la Serna, SW. Botchway, and SI. Pascu
Chemistry - A European Journal. doi: 10.1002/chem.201605232
Electroformation of Giant Unilamellar Vesicles on Stainless Steel Electrodes
V Pereno, D Carugo, L Bau, E Sezgin, J Bernardino de la Serna, C Eggeling, E Stride
ACS Omega 2 (3), pp 994–1002
Glycosylation and Lipids Working in Concert Direct CD2 Ectodomain Orientation and Presentation
A Polley, A Orlowski, R Danne, AA Gurtovenko, J Bernardino de la Serna, C Eggeling, SJ Davis, T Rog, I Vattulainen
J Phys Chem Lett. doi: 10.1021/acs.jpclett.6b02824
Modulation of the molecular arrangement in artificial and biological membranes by phospholipid-shelled microbubbles
D Carugo*, M Aron*, E Sezgin, J Bernardino de la Serna, M Kuimova, C Eggeling, and E Stride
Biomaterials, 113, 105-117 ​
2016


There Is No Simple Model of the Plasma Membrane Organization
J Bernardino de la Serna, G J. Schütz, C Eggeling, and M Cebecauer
Front. Cell Dev. Biol., DOI: 10.3389/fcell.2016.00106
“Critical importance of fixation conditions in super-resolution imaging of receptor clustering
T Stanly, M Fritzsche, S Banerji, E Garcia, J Bernardino de la Serna, D Jackson, C Eggeling
Biol. Open doi: 10.1242/bio.019943
WIP and WICH/WIRE co-ordinately control invadopodium formation and maturation in human breast cancer cell invasion
E García, C Ragazzini, X Yu, E Cuesta-García, J Bernardino de la Serna, T Zech, D Sarrió, L M Machesky, I M Antón
Scientific Reports. vol 6 23590
Measurement of the EGFR oligomerization organizes kinase-active dimers into competent signalling platforms​
Needham, Sarah R.; Roberts, Selene K.; Arkhipov, Anton; et al.
NATURE COMMUNICATIONS, Volume: 7 Article Number: 13307 Published: OCT 31 2016
Measurement of the Raman spectra and hygroscopicity of four pharmaceutical aerosols as they travel from pressurised metered dose inhalers (pMDI) to a model lung
N. Davidson, H.-J. Tong, M. Kalberer, P.C. Seville, d, A.D. Ward, M.K. Kuimova, F.D. Pope
INTERNATIONAL JOURNAL OF PHARMACEUTICS Volume 520, Issues 1–2, 30 March 2017, Pages 59–69(2017)
Dynamic viscosity mapping of the oxidation of squalene aerosol particles
Athanasiadis A, Fitzgerald C, Davidson NM, Giorio C, Botchway SW, Ward AD, Kalberer M, Pope FD, Kuimova MK
Phys Chem Chem Phys. 2016 Oct 26
A C-terminal amphipathic helix is necessary for the in vivo tubule-shaping function of a plant reticulon
Breeze E, Dzimitrowicz N, Kriechbaumer V, Brooks R, Botchway SW, Brady JP, Hawes C, Dixon AM, Schnell JR, Fricker MD, Frigerio L
Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):10902-7. doi: 10.1073/pnas.1605434113
The use of DAPI fluorescence lifetime imaging for investigating chromatin condensation in human chromosomes
Estandarte AK, Botchway S, Lynch C, Yusuf M, Robinson I
Sci Rep. 2016 Aug 16;6:31417. doi: 10.1038/srep31417.
Fluorescence lifetime imaging of optically levitated aerosol: a technique to quantitatively map the viscosity of suspended aerosol particles.
Fitzgerald C, Hosny NA, Tong H, Seville PC, Gallimore PJ, Davidson NM, Athanasiadis A, Botchway SW, Ward AD, Kalberer M, Kuimova MK, Pope FD
Phys Chem Chem Phys. 2016 Aug 21;18(31):21710-9. doi: 10.1039/c6cp03674k
Heteronuclear Ir(III)-Ln(III) Luminescent Complexes: Small-Molecule Probes for Dual Modal Imaging and Oxygen Sensing
Jana A, Crowston BJ, Shewring JR, McKenzie LK, Bryant HE, Botchway SW, Ward AD, Amoroso AJ, Baggaley E, Ward MD
Inorg Chem. 2016 Jun 6;55(11):5623-33. doi: 10.1021/acs.inorgchem.6b00702.
Localization and interactions between Arabidopsis auxin biosynthetic enzymes in the TAA/YUC-dependent pathway.
Kriechbaumer V, Botchway SW, Hawes C
J Exp Bot. 2016 Jul;67(14):4195-207. doi: 10.1093/jxb/erw195.
New Approaches to Photodynamic Therapy from Type I, II and III to Type IV Using One or More Photons
Scherer KM, Bisby RH, Botchway SW, Parker AW.
Anticancer Agents Med Chem. 2016 May 13.
Molybdenum Speciation and its Impact on Catalytic Activity during Methane Dehydroaromatization in Zeolite ZSM-5 as Revealed by Operando X-Ray Methods
Lezcano-González I, Oord R, Rovezzi M, Glatzel P, Botchway SW, Weckhuysen BM, Beale AM.
Angew Chem Int Ed Engl. 2016 Apr
Uniform patchy and hollow rectangular platelet micelles from crystallizable polymer blends (link opens in a new window)
Qiu H, Gao Y, Boott CE, Gould OEC, Harniman RL, Miles MJ, Webb SED, Winnik MA, Manners I
SCIENCE 352(6286):697-701 (2016)
Characterisation of the effects of optical aberrations in single molecule techniques (link opens in a new window)
Benjamin C. Coles, Stephen E. D. Webb, Noah Schwartz, Daniel J. Rolfe, Marisa Martin-Fernandez, and Valentina Lo Schiavo
Biomedical Optics Express Vol. 7, Issue 5, pp. 1755-1767 (2016)
A tale of the epidermal growth factor receptor: The quest for structural resolution on cells (link opens in a new window)

Christopher J. Tynan, Valentina Lo Schiavo, Laura Zanetti-Domingues, Sarah R. Needham, Selene K. Roberts, Michael Hirsch, Daniel J. Rolfe, Dimitrios Korovesis, David T. Clarke and Marisa L. Martin-Fernandez
METHODS Volume: 95 Pages: 86-93
Imaging and radiation effects of gold nanoparticles in tumour cells (link opens in a new window)
McQuaid HN, Muir MF, Taggart LE, McMahon SJ, Coulter JA, Hyland WB, Jain S, Butterworth KT, Schettino G, Prise KM, Hirst DG, Botchway SW, Currell FJ.
NAT. SCI REP. 2016 Jan 20;6:19442. doi: 10.1038/srep19442
Interactions Between an Aryl Thioacetate-Functionalized Zn(II) Porphyrin and Graphene Oxide (link opens in a new window)

Boyan Mao, Dr.; David Gonzalez Calatayud, Dr.; Vincenzo Mirabello, Dr.; Benjamin J Hodges; José Alberto Martins, Dr.; Stanley W. Botchway, Prof.; John M. Mitchels, Dr.; Sofia Ioana Pascu, Dr
(2016) AFM
In Vivo Quantification of Peroxisome Tethering to Chloroplasts in Tobacco Epidermal Cells Using Optical Tweezers (link opens in a new window)
Gao H, Metz J, Teanby NA, Ward AD, Botchway SW, Coles B, Pollard MR, Sparkes I
PLANT PHYSIOL. 2016 Jan;170(1):263-72. doi: 10.1104/pp.15.01529. Epub 2015 Oct 30.
Periodic actin structures in neuronal axons are required to maintain microtubules (link opens in a new window)
Yue Qu, Ines Hahn, Stephen E.D. Webb, Simon P. Pearce, and Andreas Prokop
Molecular Biology of the Cell, Vol. 28, No. 2
2015


Directly interrogating single quantum dot labelled UvrA2 molecules on DNA tightropes using an optically trapped nanoprobe (link opens in a new window)

Simons M, Pollard MR, Hughes CD, Ward AD, Van Houten B, Towrie M, Botchway SW, Parker AW, Kad NM
SCI REP. 2015 Dec 22;5:18486. doi: 10.1038/srep18486.


Microwave gallium-68 radiochemistry for kinetically stable bis(thiosemicarbazone) complexes: structural investigations and cellular uptake under hypoxia (link opens in a new window)

Alam IS, Arrowsmith RL, Cortezon-Tamarit F, Twyman F, Kociok-Köhn G, Botchway SW, Dilworth JR, Carroll L, Aboagye EO, Pascu SI
DALTON TRANS. 2015 Dec 14;45(1):144-55. doi: 10.1039/c5dt02537k


In Situ Visualization of Block Copolymer Self-Assembly in Organic Media by Super-Resolution Fluorescence Microscopy (link opens in a new window)

Boott CE, Laine RF, Mahou P, Finnegan JR, Leitao EM, Webb SED, Kaminski CF, Manners I
CHEMISTRY – A EUROPEAN JOURNAL 21 (51), 18539-18542 (2015)


Effect of phosphorylation on the EGFR dimer stability probed by single-molecule dynamics and FRET/FLIM (link opens in a new window)
Oana Coban, Laura Zanetti-Dominguez, Daniel R. Matthews, Daniel J. Rolfe, Gregory, Weitsman, Paul R. Barber, Jody Barbeau, Viviane Devauges, Florian Kampmeier, Martyn Winn, Borivoj Vojnovic4, Peter J. Parker, Keith A. Lidke, Diane S Lidke, Simon M. Ameer-Beg, Marisa L. Martin-Fernandez and Tony Ng
BIOPHYS. J. 108 (5), 1013-1026. DOI: 10.1016/j.bpj.2015.01.005


Nanometric molecular separation measurements by single molecule photobleaching (link opens in a new window)
Stephen E D Webb, Michael Hirsch, Sarah R Needham, Benji C Coles, Selene K Roberts, Laura C Zanetti-Domingues, Christopher J Tynan, Marisa L. Martin-Fernandez and Daniel J Rolfe
METHODS (doi: 10.1016/j.ymeth.2015.05.009)


Three-dimensional imaging and uptake of the anticancer drug combretastatin in cell spheroids and photoisomerization in gels with multiphoton excitation (link opens in a new window)
Scherer KM, Bisby RH, Botchway SW, Hadfield JA, Haycock JW, Parker AW.
J BIOMED OPT. 2015 Jul;20(7):78003. doi: 10.1117/1.JBO.20.7.078003.


Reticulomics: Protein-protein interaction studies with two plasmodesmata-localised reticulon family proteins identify binding partners enriched at plasmodesmata, ER and the plasma membrane (link opens in a new window)
Kriechbaumer V, Botchway SW, Slade SE, Knox K, Frigerio L, Oparka KJ, Hawes C
PLANT PHYSIOL. 2015 Sep 9. pii: pp.01153.2015. [Epub ahead of print]


Environmental Pollutant Ozone Causes Damage to Lung Surfactant Protein B (SP-B) (link opens in a new window)

Hemming JM, Hughes BR, Rennie AR, Tomas S, Campbell RA, Hughes AV, Arnold T, Botchway SW, Thompson KC
BIOCHEMISTRY. 2015 Aug 25;54(33):5185-97. doi: 10.1021/acs.biochem.5b00308. Epub 2015 Aug 13.


Determining the geometry of oligomers of the human epidermal growth factor family on cells with 7 nm resolution (link opens in a new window)  

Laura C. Zanetti-Domingues, Michael Hirsch, Christopher J. Tynan, Daniel J. Rolfe, Teodor Boyadzhiev, Kathrin Scherer, David T. Clarke, Marisa L. Martin-Fernandez, and Sarah R. Needham
PROGRESS IN BIOPHYS & MOL BIOL. (doi:10.1016/j.pbiomolbio.2015.04.002)


Determining the geometry of oligomers of the human epidermal growth factor family on cells with <10 nm resolution (link opens in a new window)
Sarah R. Needham, Laura C. Zanetti-Domingues, David T. Clarke, Michael Hirsch, Marisa L. Martin-Fernandez, Selene K. Roberts, Daniel J. Rolfe, Kathrin Scherer, Christopher J. Tynan
BIOCHEM. SOC. TRANS. (3):309-14. doi: 10.1042/BST20140318.)


Imaging intracellular and systemic in vivo gold nanoparticles to enhance radiotherapy (link opens in a new window)
Botchway SW, Coulter JA, Currell FJ
BR J RADIOL. 2015 Oct;88(1054):20150170. doi: 10.1259/bjr.20150170. Epub 2015 Jun 29


A series of flexible design adaptations to the Nikon E-C1 and E-C2 confocal microscope systems for UV, multiphoton and FLIM imaging (link opens in a new window)

Botchway SW, Scherer KM, Hook S, Stubbs CD, Weston E, Bisby RH, Parker AW
J MICROS. 2015 Feb 9. doi: 10.1111/jmi.12218. [Epub ahead of print]
A fluorescent Arg-Gly-Asp (RGD) peptide-naphthalenediimide (NDI) conjugate for imaging integrin avß3in vitro (link opens in a new window)Hu Z, Arrowsmith RL, Tyson JA, Mirabello V, Ge H, Eggleston IM, Botchway SW, Dan Pantos G, Pascu SI
CHEM. COMMUN. (CAMB). 2015 Feb 3. [Epub ahead of print] PMID: 25647279
Confocal and fluorescence lifetime imaging sheds light on the fate of a pyrene-tagged carbon monoxide-releasing Fischer carbene chromium complex (link opens in a new window)
Arrowsmith RL, Atkin AJ, Botchway SW, Fairlamb IJ, Lynam JM, Moir JW, Pascu SI, Ward JS, Zhang WQ
DALTON TRANS. 2015 Jan 2. [Epub ahead of print] PMID: 25553721 publisher
Anticancer phototherapy using activation of E-combretastatins by two-photon-induced isomerization (link opens in a new window)

Scherer KM, Bisby RH, Botchway SW, Hadfield JA, Parker AW
J BIOMED OPT. 2015 May;20(5):051004. doi: 10.1117/1.JBO.20.5.051004
Microfluidic generation of monodisperse ultra-low interfacial tension oil droplets in water (link opens in a new window)

Bolognesi, G., Hargreaves, A., Kirby, A.K., Ward, A., Bain, C.D., Ces, O.,
RSC Adv., 2015,5, 8114-8121, DOI: 10.1039/c4ra14967j
Atmospherically relevant core-shell aerosol studied using optical trapping and Mie scattering (link opens in a new window)

S. H. Jones, M. D. King and A. D. Ward
CHEMICAL COMMUNICATIONS, 2015, 51, 4914 – 4917

2014

Re and (99m)Tc complexes of BodP3--multi-modality imaging probes (link opens in a new window)

Arrowsmith RL, Ge H, Pascu SI, Botchway SW, Clegg W, Harrington RW, Higham LJ
CHEM COMMUN (CAMB). 2014 Dec 21;50(98):15503-5. doi: 10.1039/c4cc06367h. Epub 2014 Sep 24
The transmembrane domain of N-acetylglucosaminyltransferase I is the key determinant for its Golgi subcompartmentation (link opens in a new window)

Schoberer J, Liebminger E, Vavra U, Veit C, Castilho A, Dicker M, Maresch D, Altmann F, Hawes C, Botchway SW, Strasser R
PLANT J. 2014 Dec;80(5):809-22. doi: 10.1111/tpj.12671. Epub 2014 Oct 21
Combined two-photon excitation and d?f energy transfer in a water-soluble Ir(III)/Eu(III) dyad: two luminescence components from one molecule for cellular imaging (link opens in a new window)

Baggaley E, Cao DK, Sykes D, Botchway SW, Weinstein JA, Ward MD
2014 Jul 14;20(29):8898-903. doi: 10.1002/chem.201403618. Epub 2014 Jun 16. Erratum in: Chemistry. 2014 Dec 22;20(52):17242.
Investigating protein-protein interactions in the plant endomembrane system using multiphoton-induced FRET-FLIM (link opens in a new window)

Schoberer J, Botchway SW
METHODS MOL BIOL. 2014;1209:81-95. doi: 10.1007/978-1-4939-1420-3_6
Ditopic boronic acid and imine-based naphthalimide fluorescence sensor for copper(II) (link opens in a new window)

Li M, Ge H, Arrowsmith RL, Mirabello V, Botchway SW, Zhu W, Pascu SI, James TD
Chem Commun (Camb). 2014 Oct 14;50(80):11806-9. doi: 10.1039/c4cc03453h
Fluorescence lifetime imaging microscopy analysis of defects in multi-tube physical vapor transport grown Cd1-xZnxTe (link opens in a new window)

Schneider, Andreas; Veale, Matthew C.; Bell, Steven J., Botchway SW., et al.
PHYSICA STATUS SOLIDI A-APPLICATIONS AND MATERIALS SCIENCE Volume: 211 Issue: 9 Pages: 2121-2125 Published: SEP 2014
Hydrothermal conversion of one-photon-fluorescent poly(4-vinylpyridine) into two-photon-fluorescent carbon nanodots (link opens in a new window)

Lawrence K, Xia F, Arrowsmith RL, Ge H, Nelson GW, Foord JS, Felipe-Sotelo M, Evans ND, Mitchels JM, Flower SE, Botchway SW, Wolverson D, Aliev GN, James TD, Pascu SI, Marken F. Langmuir
2014 Oct 7;30(39):11746-52. doi: 10.1021/la404866s. Epub 2014 Mar 21
Dinuclear ruthenium(II) complexes as two-photon, time-resolved emission microscopy probes for cellular DNA (link opens in a new window)

Baggaley E, Gill MR, Green NH, Turton D, Sazanovich IV, Botchway SW, Smythe C, Haycock JW, Weinstein JA, Thomas JA
ANGEW CHEM INT ED ENGL. 2014 Mar 24;53(13):3367-71. doi: 10.1002/anie.201309427. Epub 2014 Jan 23.

Single-cell Raman sorting (link opens in a new window)

Li M, Boardman DG, Ward A, Huang WE
METHODS MOL. BIOL. 2014;1096: 147-53. doi: 10.1007/978-1-62703-712-9_12


The ErbB4 CYT2 variant protects EGFR from ligand-induced degradation to enhance cancer cell motility (link opens in a new window)

Tai Kiuchi, Elena Ortiz-Zapater James Monypenny, Daniel R. Matthews, Jody Barbeau, Oana Coban, Katherine Lawler, Brian Burford, Daniel Rolfe, Emanuele de Rinaldis, Dimitra Dafou, Michael A. Simpson, Natalie Woodman, Sarah Pinder, Cheryl E. Gillett, Viviane Devauges, Simon P. Poland, Gilbert Fruhwirth, Pierfrancesco Marra, Ykelien L. Boersma Andreas Plückthun, William J Gullick, Yosef Yarden, George Santis, Martyn Winn, Marisa L. Martin-Fernandez, Peter Parker, Andrew Tutt, Simon M. Ameer-Beg, Tony Ng.
Sci. Signal., Vol. 7, Issue 339, p. ra78 DOI: 10.1126/scisignal.2005157


Heterogeneous Interaction of SiO2 with N2O5: Aerosol Flow Tube and Single Particle Optical Levitation-Raman Spectroscopy Studies (link opens in a new window)

Tang, MJ; Camp, JCJ ; Rkiouak, L; McGregor, J; Watson, IM; Cox, RA; Kalberer, M; Ward, AD; Pope, FD
JOURNAL OF PHYSICAL CHEMISTRY A, 118, 38, 8817-8827, 2014 DOI: 10.1021/jp506753c
Rapid interrogation of the physical and chemical characteristics of salbutamol sulphate aerosol from a pressurised metered-dose inhaler (pMDI) (link opens in a new window)

Tong, HJ; Fitzgerald, C; Gallimore, PJ; Kalberer, M; Kuimova, MK; Seville, PC; Ward, AD; Pope, FD
CHEMICAL COMMUNICATIONS, 50 (98), 15499-15502, DOI:10.1039/c4cc05803h
Dinuclear Ruthenium( II) Complexes as Two- Photon, Time- Resolved Emission Microscopy Probes for Cellular DNA (link opens in a new window)

Baggaley, Elizabeth; Gill, Martin R.; Green, Nicola H.; Turton, David; Sazanovich, Igor V.; Botchway, Stanley W.; Smythe, Carl; Haycock, John W.; Weinstein, Julia A.; Thomas, Jim A.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 53, 3367-3371 (2014)
Structure-function relationships and supramolecular organization of the EGFR (epidermal growth factor receptor) on the cell surface (link opens in a new window)

Needham, Sarah R.; Zanetti-Domingues, Laura C.; Hirsch, Michael; Rolfe, Daniel J.; Tynan, Christopher J.; Roberts, Selene K.; Martin-Fernandez, Marisa L.; Clarke, David T.
BIOCHEMICAL SOCIETY TRANSACTIONS 42, 114-119 (2014)
Long-lived metal complexes open up microsecond lifetime imaging microscopy under multiphoton excitation: from FLIM to PLIM and beyond (link opens in a new window)

Baggaley, Elizabeth; Botchway, Stanley W.; Haycock, John W.; Morris, Hayley; Sazanovich, Igor V.; Williams, J. A. Gareth; Weinstein, Julia A.
CHEMICAL SCIENCE 5, 879-886 (2014)
Optical trapping and Raman spectroscopy of solid particles (link opens in a new window)

Rkiouak, L.; Tang, M. J.; Camp, J. C. J.; McGregor, J.; Watson, I. M.; Cox, R. A.; Kalberer, M.; Ward, A. D.; Pope, F. D.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS 16, 11426-11434 (2014)

2013

A ‘Pocket Guide’ to Total Internal Reflection Fluorescence (link opens in a new window)

Martin-Fernandez, ML; Tynan, CJ, Webb, SED
JOURNAL OF MICROSCOPY 252: 16-22 (2013)


Microcrystal manipulation with laser tweezers (link opens in a new window)

Wagner, Armin; Duman, Ramona; Stevens, Bob; Ward, Andy
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 69, 1297-1302 (2013)
Spatiotemporal dynamics of DNA repair proteins following laser microbeam induced DNA damage - When is a DSB not a DSB? (link opens in a new window)

Reynolds, Pamela; Botchway, Stanley W.; Parker, Anthony W.; O'Neill, Peter
MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS756, 14-20 (2013)
Laser heating of sulfuric acid droplets held in air by laser Raman tweezers (link opens in a new window)

Hunt, Oliver R.; Ward, Andrew D.; King, Martin D.
RSC ADVANCES 3, 19448-19454 (2013)
Determining the unique refractive index properties of solid polystyrene aerosol using broadband Mie scattering from optically trapped beads (link opens in a new window)

Jones, Stephanie H.; King, Martin D.; Ward, Andrew D.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS 15 20735-20741 (2013)
Second-harmonic scattering in aqueous urea solutions: evidence for solute clusters? (link opens in a new window)

Ward, Martin R.; Botchway, Stanley W.; Ward, Andrew D.; Alexander, Andrew J.
FARADAY DISCUSSIONS 167, 441-454 (2013)
Time-Resolved Fluorescence Imaging Reveals Differential Interactions of N-Glycan Processing Enzymes across the Golgi Stack in Planta (link opens in a new window)

Schoberer, Jennifer; Liebminger, Eva; Botchway, Stanley W.; Strasser, Richard; Hawes, Chris
PLANT PHYSIOLOGY 161, 1737-1754 (2013)
Degradation and Rearrangement of a Lung Surfactant Lipid at the Air-Water Interface during Exposure to the Pollutant Gas Ozone (link opens in a new window)

Thompson, Katherine C.; Jones, Stephanie H.; Rennie, Adrian R.; King, Martin D.; Ward, Andrew D.; Hughes, Brian R.; Lucas, Claire O. M.; Campbell, Richard A.; Hughes, Arwel V
LANGMUIR 29, 4594-4602 (2013)

Hydrophobic fluorescent probes introduce artifacts into single molecule tracking experiments due to non-specific binding (link opens in a new window)

Zanetti-Domingues, LC; Tynan, CJ; Rolfe, DJ; Clarke, DT; Martin-Fernandez, ML
PLoS ONE 8 (9): e74200 (2013) 


Measuring EGFR separations on cells with ~10 nm resolution via fluorophore localization imaging with photobleaching (link opens in a new window)

Needham, SR; Hirsch, M; Rolfe, DJ; Clarke, DT; Zanetti-Domingues, LC; Wareham, R; Martin-Fernandez, ML
PLoS ONE 8 (5): e62331 (2013)  


A Stochastic Model for Electron Multiplication Charge-Coupled Devices – From Theory to Practice (link opens in a new window)

Hirsch, M; Wareham, RJ; Martin-Fernandez, ML; Hobson, MP; Rolfe, DJ
PLoS ONE 8 (1): e53671 (2013)


2012

A systematic investigation of differential effects of cell culture substrates on the extent of artifacts in single-molecule tracking (link opens in a new window)

Zanetti-Domingues, LC; Martin-Fernandez, ML; Needham, SR; Rolfe, DJ; Clarke, DT
PLoS ONE 7 (9): e45655 (2012)


Single Molecule Fluorescence Detection and Tracking in Mammalian Cells: The State-of-the Art and Future Perspectives (link opens in a new window)

Martin-Fernandez, ML; Clarke, DT
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 13 (11): 14742-14765 (2012)


Cell wall constrains lateral diffusion of plant plasma-membrane proteins (link opens in a new window)  

A. Martinière, I. Lavagi, G. Nageswaran, D.J. Rolfe, L. Maneta-Peyret, Doan-Trung Luu, S.W. Botchway, S.E.D. Webb, S. Mongrand, C. Maurel, M.L. Martin-Fernandez, J. Kleine-Vehn, J. Friml, P. Moreau, J. Runions
PNAS (2012)


Multicolor single molecule imaging in cells with near infra-red dyes (link opens in a new window)

Tynan, CJ; Clarke, DT; Coles, BC; Martin-Fernandez, ML; Webb, SED
PLoS ONE 7 (4): e36265 (2012)


Investigating the conformation of HER membrane proteins in cells via single molecule and FLIM microscopy (link opens in a new window)

Martin-Fernandez, ML; Clarke, DT; Hirsch, M; Needham, SR; Roberts, SK; Rolfe, DJ; Tynan, CJ; Webb, SED; Winn, M; Zanetti-Domingues, L
MOLECULAR IMAGING ISBN 978-953-51-0359-2 (2012)


Multicolour single molecule imaging on cells using a supercontinuum source (link opens in a new window)

Webb, SED; Rolfe, DJ; Coles, BC; Wareham, R; Martin-Fernandez, ML
BIOMEDICAL OPTICS EXPRESS 3 (3): 400-406 (2012)


Laser-induced radiation microbeam technology and simultaneous real-time fluorescence imaging in live cells (link opens in a new window)

Botchway, SW; Reynolds, P; Parker, AW; O'Neill, P
METHODS IN ENZYMOLOGY 504: 3-28 (2012)


Direct interaction of baculovirus capsid proteins VP39 and EXON0 with kinesin-1 in insect cells determined by fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy (link opens in a new window)

Danquah, JO; Botchway, S; Jeshtadi, A; King, LA
JOURNAL OF VIROLOGY 86 (2): 844-853 (2012)


Incandescent porous carbon microspheres to light up cells: solution phenomena and cellular uptake (link opens in a new window)

Duffy, P; Magno, LM; Yadav, RB; Roberts, SK; Ward, AD; Botchway, SW; Colavita, PE; Quinn, SJ
JOURNAL OF MATERIALS CHEMISTRY 22 (2): 432-439 (2012)


Human epidermal growth factor receptor (HER1) aligned on the plasma membrane adopts key features of Drosophila EGFR asymmetry (link opens in a new window)

Martin-Fernandez, ML
BIOCHEMICAL SOCIETY TRANSACTIONS 40, 184-188 (2012)


Investigating extracellular in situ EGFR structure and conformational changes using FRET microscopy (link opens in a new window)

Roberts, SK; Tynan, CJ; Winn, M; Martin-Fernandez, ML
BIOCHEMICAL SOCIETY TRANSACTIONS 40 (1), 189-194 (2012)


Two-photon excitation with pico-second fluorescence lifetime imaging to detect nuclear association of flavanols (link opens in a new window)

Mueller-Harvey, I; Feucht, W; Polster, J; Trnkova, L; Burgos, P; Parker, AW; Botchway, SW

ANALYTICA CHIMICA ACTA 719: 68-75 (2012).


2011

Subcellular and single-molecule imaging of plant fluorescent proteins using total internal reflection fluorescence microscopy (TIRFM) (link opens in a new window)

Vizcay-Barrena, G; Webb, SED; Martin-Fernandez, ML; Wilson, ZA
JOURNAL OF EXPERIMENTAL BOTANY 62 (15): 5419-5428 (2011)


Human epidermal growth factor receptor (EGFR) aligned on the plasma membrane adopts key features of Drosophila EGFR asymmetry (link opens in a new window)

​Tynan, CJ; Roberts, SK; Rolfe, DJ; Clarke, DT; Loeffler, HH; Kaestner, J; Winn, MD; Parker, PJ; Martin-Fernandez, ML
MOLECULAR AND CELL BIOLOGY 31 (11): 2241-2252 (2011)


CAR modulates E-cadherin dynamics in the presence of adenovirus type 5 (link opens in a new window)

Hussain, F; Morton, PE; Snippe, M; Sullivan, J; Farmer, C; Martin-Fernandez, ML; Parsons, M; Santis, G
PLOS ONE 6 (8): 10.1371 (2011)


Circular dichroism and its use in protein-folding studies

Clark​e, DT
METHODS IN MOLECULAR BIOLOGY 752: 59-72 (2011)


Development of fluorophore dynamics imaging as a probe for lipid domains in model vesicles and cell membranes (link opens in a new window)

Botchway, SW; Lewis, AM; Stubbs, CD
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 40(2): 131-141 (2011)


Automated multidimensional single molecule fluorescence microscopy feature detection and tracking (link opens in a new window)

Rolfe, DJ; McLachlan, CI; Hirsch, M; Needham, SR; Tynan, CJ; Webb, SED; Martin-Fernandez, ML; Hobson, MP
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 40 (10): 1167-1186 (2011)


Optics clustered to output unique solutions: A multi-laser facility for combined single molecule and ensemble microscopy (link opens in a new window)

Clarke, DT; Botchway, SW; Coles, BC; Needham, SR; Roberts, SK; Rolfe, D​J; Tynan, CJ; Ward, AD; Webb, SED; Yadav, R; Zanetti-Domingues, L; Martin-Fernandez, ML
REVIEW OF SCIENTIFIC INSTRUMENTS 82 (9): 93705 (2011)








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Contact: Martin-Fernandez, Marisa (STFC,RAL,CLF)